Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMCO4Q9NRQ5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 OR2I1P-207ENST00000453522 948 ntBASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 BHLHE23-202ENST00000612929 1109 ntBASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.85□□□□□ -0.03
SMCO4Q9NRQ5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 UBALD1-205ENST00000590891 2641 ntBASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 RNF126P1-201ENST00000567452 1320 ntBASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms