Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 AL023803.3-201ENST00000615559 522 ntBASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 AC116562.4-202ENST00000641738 218 ntBASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 AC128688.1-201ENST00000487626 519 ntBASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZFYVE1Q9HBF4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 AL353719.1-201ENST00000566847 864 ntBASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 LINC01568-207ENST00000641790 1380 ntBASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 AC092338.2-201ENST00000568827 1415 ntBASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ZFYVE1Q9HBF4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZFYVE1Q9HBF4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 AP000974.1-201ENST00000623909 2387 ntBASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 AC133561.5-201ENST00000635547 218 ntBASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 AL512353.2-201ENST00000448759 1962 ntBASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFYVE1Q9HBF4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms