Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC098590.1-201ENST00000468126 897 ntBASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 GCSHP5-201ENST00000443090 522 ntBASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRRC40Q9H9A6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 FAM207BP-201ENST00000447172 505 ntBASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 UBE2SP1-201ENST00000450587 669 ntBASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 MIR6786-201ENST00000616843 113 ntBASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 AC130371.2-201ENST00000619443 611 ntBASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC40Q9H9A6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 WIZP1-201ENST00000531444 2299 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms