Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 AP005242.2-201ENST00000580065 1175 ntBASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SCAF1Q9H7N4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 BID-203ENST00000399765 1879 ntTSL 2 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SCAF1Q9H7N4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 AL845331.1-201ENST00000424978 1190 ntBASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 TSPY21P-201ENST00000433481 731 ntBASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 TSPY23P-201ENST00000440136 739 ntBASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 AL671277.2-201ENST00000458060 996 ntBASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 AL138966.2-201ENST00000621997 464 ntBASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SCAF1Q9H7N4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AL359075.1-203ENST00000462729 1002 ntBASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AC137695.1-201ENST00000604126 489 ntBASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 CR769767.2-201ENST00000622735 460 ntBASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AC116407.4-201ENST00000623319 1061 ntBASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 AL031985.4-201ENST00000642138 673 ntBASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SCAF1Q9H7N4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 KRT8P10-201ENST00000450021 1447 ntBASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AL356652.1-201ENST00000615962 565 ntBASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 FSCN1P1-201ENST00000568912 1481 ntBASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
SCAF1Q9H7N4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SCAF1Q9H7N4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC28.04■■■□□ 2.08
SCAF1Q9H7N4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms