Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 HLA-A-209ENST00000638375 975 ntBASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J3Q9H1A7 BICD1-207ENST00000551848 1962 ntBASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J3Q9H1A7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR2J3Q9H1A7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR2J3Q9H1A7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 KRT17P3-201ENST00000420566 1262 ntBASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J3Q9H1A7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms