Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 HTR7P1-201ENST00000538670 1336 ntBASIC20.06■□□□□ 0.8
TRIM7Q9C029 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM7Q9C029 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM7Q9C029 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 AL031598.1-201ENST00000561511 1773 ntBASIC20.05■□□□□ 0.8
TRIM7Q9C029 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
TRIM7Q9C029 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM7Q9C029 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 PRORSD1P-201ENST00000295112 541 ntBASIC20.04■□□□□ 0.8
TRIM7Q9C029 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 NIFKP9-201ENST00000419265 221 ntBASIC20.04■□□□□ 0.8
TRIM7Q9C029 AC004980.1-204ENST00000429707 299 ntBASIC20.04■□□□□ 0.8
TRIM7Q9C029 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 AL445675.2-201ENST00000620291 557 ntBASIC20.04■□□□□ 0.8
TRIM7Q9C029 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.04■□□□□ 0.8
TRIM7Q9C029 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM7Q9C029 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM7Q9C029 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM7Q9C029 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM7Q9C029 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM7Q9C029 AL512353.2-201ENST00000448759 1962 ntBASIC20.03■□□□□ 0.8
TRIM7Q9C029 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM7Q9C029 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM7Q9C029 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms