Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AC079781.3-201ENST00000449110 356 ntBASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AP003733.1-201ENST00000491725 852 ntBASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AC090616.6-201ENST00000582640 721 ntBASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH11YQ9BZA8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH11YQ9BZA8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 MIR564-202ENST00000385049 94 ntBASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 AC104819.1-201ENST00000504587 486 ntBASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 AL160237.2-201ENST00000556165 472 ntBASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDH11YQ9BZA8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH11YQ9BZA8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 TREX1-205ENST00000625293 1783 ntBASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 KRT8P32-201ENST00000512863 1461 ntBASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDH11YQ9BZA8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 MIR3180-4-201ENST00000582223 153 ntBASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 LINC01711-201ENST00000598340 967 ntBASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH11YQ9BZA8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDH11YQ9BZA8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
PCDH11YQ9BZA8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH11YQ9BZA8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDH11YQ9BZA8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH11YQ9BZA8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms