Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 GRAMD4P2-201ENST00000423297 1097 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC010141.2-201ENST00000452426 721 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC087633.2-202ENST00000565166 1439 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 GRAMD4P7-201ENST00000578182 1232 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 MIR4767-201ENST00000582827 78 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AC243732.1-201ENST00000612648 864 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AL355001.2-201ENST00000620617 1191 ntBASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LCE3DQ9BYE3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC067852.2-201ENST00000590513 2313 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 PTBP1P-201ENST00000554374 1601 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC5.09□□□□□ -1.59
LCE3DQ9BYE3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms