Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 ESRRAP1-201ENST00000400596 1257 ntBASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 LTB4R2-202ENST00000528054 3092 ntBASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CROCCP1-201ENST00000426910 5675 ntBASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 F2R-202ENST00000505600 442 ntTSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 MTDHP1-201ENST00000605323 784 ntBASIC15□□□□□ -0.01
CHRDL1Q9BU40 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRDL1Q9BU40 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 NBPF21P-201ENST00000425093 1451 ntBASIC15□□□□□ -0.01
CHRDL1Q9BU40 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRDL1Q9BU40 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 SDHAP1-207ENST00000440850 2000 ntBASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 AC104417.2-201ENST00000562989 1793 ntBASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms