Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
TM9SF2Q99805 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TM9SF2Q99805 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TM9SF2Q99805 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 KRT16P1-201ENST00000399124 1418 ntBASIC17.51■□□□□ 0.39
TM9SF2Q99805 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 AL355075.4-201ENST00000554988 638 ntBASIC17.51■□□□□ 0.39
TM9SF2Q99805 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 C1QL1P1-201ENST00000568105 661 ntBASIC17.51■□□□□ 0.39
TM9SF2Q99805 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TM9SF2Q99805 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 CROCCP3-202ENST00000420820 1947 ntBASIC17.51■□□□□ 0.39
TM9SF2Q99805 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF2Q99805 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 KRT18P16-201ENST00000510337 1294 ntBASIC17.5■□□□□ 0.39
TM9SF2Q99805 NUDT16P1-203ENST00000513809 620 ntBASIC17.5■□□□□ 0.39
TM9SF2Q99805 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 LINC01023-201ENST00000606054 436 ntBASIC17.5■□□□□ 0.39
TM9SF2Q99805 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF2Q99805 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF2Q99805 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 CR392000.1-201ENST00000624770 1228 ntBASIC17.49■□□□□ 0.39
TM9SF2Q99805 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF2Q99805 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF2Q99805 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms