Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 AC012615.1-201ENST00000565797 1299 ntBASIC20.25■□□□□ 0.83
YME1L1Q96TA2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
YME1L1Q96TA2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 AL022342.1-201ENST00000400363 863 ntBASIC20.24■□□□□ 0.83
YME1L1Q96TA2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 AL160237.2-201ENST00000556165 472 ntBASIC20.24■□□□□ 0.83
YME1L1Q96TA2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.24■□□□□ 0.83
YME1L1Q96TA2 Z83836.1-201ENST00000624605 1642 ntBASIC20.24■□□□□ 0.83
YME1L1Q96TA2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 KRT18P31-201ENST00000506277 1292 ntBASIC20.23■□□□□ 0.83
YME1L1Q96TA2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.23■□□□□ 0.83
YME1L1Q96TA2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 AC099778.1-201ENST00000568593 1911 ntBASIC20.23■□□□□ 0.83
YME1L1Q96TA2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
YME1L1Q96TA2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 KRT18P23-201ENST00000435622 1283 ntBASIC20.22■□□□□ 0.83
YME1L1Q96TA2 AC079781.3-201ENST00000449110 356 ntBASIC20.22■□□□□ 0.83
YME1L1Q96TA2 AC104819.1-201ENST00000504587 486 ntBASIC20.22■□□□□ 0.83
YME1L1Q96TA2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 AC104692.2-201ENST00000603054 253 ntBASIC20.22■□□□□ 0.83
YME1L1Q96TA2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YME1L1Q96TA2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
YME1L1Q96TA2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
YME1L1Q96TA2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
YME1L1Q96TA2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
YME1L1Q96TA2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.21■□□□□ 0.83
YME1L1Q96TA2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms