Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 AC124283.5-201ENST00000624661 1809 ntBASIC14.43□□□□□ -0.1
LINC00479Q96M42 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ESPNP-201ENST00000270691 2015 ntBASIC14.43□□□□□ -0.1
LINC00479Q96M42 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ZNRF2P3-201ENST00000424200 374 ntBASIC14.43□□□□□ -0.1
LINC00479Q96M42 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00479Q96M42 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00479Q96M42 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 KRT8P8-201ENST00000434750 1448 ntBASIC14.42□□□□□ -0.1
LINC00479Q96M42 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 AC093787.1-201ENST00000450396 207 ntBASIC14.42□□□□□ -0.1
LINC00479Q96M42 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00479Q96M42 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00479Q96M42 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00479Q96M42 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00479Q96M42 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms