Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX27Q96L92 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX27Q96L92 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.39■□□□□ 0.86
SNX27Q96L92 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNX27Q96L92 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX27Q96L92 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNX27Q96L92 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.39■□□□□ 0.85
SNX27Q96L92 AP000523.1-201ENST00000398242 1049 ntBASIC20.39■□□□□ 0.85
SNX27Q96L92 TSPY5P-201ENST00000426936 936 ntBASIC20.39■□□□□ 0.85
SNX27Q96L92 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 AL031432.5-201ENST00000641059 760 ntBASIC20.39■□□□□ 0.85
SNX27Q96L92 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX27Q96L92 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX27Q96L92 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX27Q96L92 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNX27Q96L92 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 RCC2P3-201ENST00000418112 1537 ntBASIC20.38■□□□□ 0.85
SNX27Q96L92 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 FAM8A6P-201ENST00000407496 1135 ntBASIC20.38■□□□□ 0.85
SNX27Q96L92 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX27Q96L92 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 MIR3180-5-201ENST00000583743 153 ntBASIC20.38■□□□□ 0.85
SNX27Q96L92 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX27Q96L92 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNX27Q96L92 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX27Q96L92 AC005332.7-201ENST00000614046 2005 ntBASIC20.37■□□□□ 0.85
SNX27Q96L92 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SNX27Q96L92 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX27Q96L92 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX27Q96L92 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX27Q96L92 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNX27Q96L92 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX27Q96L92 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX27Q96L92 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.37■□□□□ 0.85
SNX27Q96L92 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.37■□□□□ 0.85
SNX27Q96L92 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SNX27Q96L92 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX27Q96L92 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNX27Q96L92 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX27Q96L92 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX27Q96L92 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
SNX27Q96L92 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX27Q96L92 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX27Q96L92 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX27Q96L92 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX27Q96L92 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX27Q96L92 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX27Q96L92 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX27Q96L92 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SNX27Q96L92 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SNX27Q96L92 AC140113.3-201ENST00000605663 199 ntBASIC20.36■□□□□ 0.85
SNX27Q96L92 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 KRT8P32-201ENST00000512863 1461 ntBASIC20.36■□□□□ 0.85
SNX27Q96L92 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX27Q96L92 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SNX27Q96L92 AL109659.2-201ENST00000606809 1674 ntBASIC20.35■□□□□ 0.85
SNX27Q96L92 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms