Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 TUBB8P6-201ENST00000436895 1288 ntBASIC19.34■□□□□ 0.69
SCG3Q8WXD2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG3Q8WXD2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG3Q8WXD2 FAM210CP-201ENST00000445714 574 ntBASIC19.33■□□□□ 0.68
SCG3Q8WXD2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG3Q8WXD2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 MMP23A-201ENST00000234610 1017 ntBASIC19.32■□□□□ 0.68
SCG3Q8WXD2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 TSPY15P-201ENST00000457163 923 ntBASIC19.32■□□□□ 0.68
SCG3Q8WXD2 NUDT16P1-203ENST00000513809 620 ntBASIC19.32■□□□□ 0.68
SCG3Q8WXD2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG3Q8WXD2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 LINC01465-201ENST00000408887 1940 ntBASIC19.31■□□□□ 0.68
SCG3Q8WXD2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 UNC93B2-201ENST00000285383 730 ntBASIC19.31■□□□□ 0.68
SCG3Q8WXD2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 NIFKP9-201ENST00000419265 221 ntBASIC19.31■□□□□ 0.68
SCG3Q8WXD2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 CR392000.1-201ENST00000624770 1228 ntBASIC19.31■□□□□ 0.68
SCG3Q8WXD2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 KRT16P1-201ENST00000399124 1418 ntBASIC19.31■□□□□ 0.68
SCG3Q8WXD2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
SCG3Q8WXD2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms