Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 ANO7L1-203ENST00000602586 1720 ntBASIC12.77□□□□□ -0.36
COPS9Q8WXC6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 AC091799.1-201ENST00000422823 811 ntBASIC12.77□□□□□ -0.37
COPS9Q8WXC6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 AL355001.2-201ENST00000620617 1191 ntBASIC12.77□□□□□ -0.37
COPS9Q8WXC6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 PTBP1P-201ENST00000554374 1601 ntBASIC12.77□□□□□ -0.37
COPS9Q8WXC6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS9Q8WXC6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 CCDC92B-201ENST00000575506 885 ntBASIC12.76□□□□□ -0.37
COPS9Q8WXC6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 ZNF815P-204ENST00000434898 1737 ntBASIC12.76□□□□□ -0.37
COPS9Q8WXC6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
COPS9Q8WXC6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS9Q8WXC6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
COPS9Q8WXC6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms