Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 AL109659.2-201ENST00000606809 1674 ntBASIC17.59■□□□□ 0.41
CT55Q8WUE5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 AL136038.4-201ENST00000603606 1261 ntBASIC17.59■□□□□ 0.41
CT55Q8WUE5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 AL121672.3-201ENST00000608644 468 ntBASIC17.59■□□□□ 0.41
CT55Q8WUE5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CT55Q8WUE5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.59■□□□□ 0.41
CT55Q8WUE5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CT55Q8WUE5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
CT55Q8WUE5 AL162741.1-201ENST00000565563 1558 ntBASIC17.58■□□□□ 0.41
CT55Q8WUE5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.58■□□□□ 0.41
CT55Q8WUE5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CT55Q8WUE5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CT55Q8WUE5 AC016734.2-201ENST00000624325 1377 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 AC125437.2-201ENST00000625180 2167 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 HLA-F-220ENST00000434407 884 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 KRT18P23-201ENST00000435622 1283 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 TPM4P1-201ENST00000436100 807 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 AC092329.2-201ENST00000598402 547 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 AC008556.1-201ENST00000610908 2040 ntBASIC17.58■□□□□ 0.4
CT55Q8WUE5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CT55Q8WUE5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CT55Q8WUE5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 PCDHAC2-203ENST00000615316 3011 ntBASIC17.57■□□□□ 0.4
CT55Q8WUE5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 AL391807.1-203ENST00000604392 2365 ntBASIC17.57■□□□□ 0.4
CT55Q8WUE5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.57■□□□□ 0.4
CT55Q8WUE5 MIR3652-201ENST00000579335 131 ntBASIC17.57■□□□□ 0.4
CT55Q8WUE5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 AL691432.3-201ENST00000621860 400 ntBASIC17.57■□□□□ 0.4
CT55Q8WUE5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CT55Q8WUE5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms