Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 AC113347.1-201ENST00000413321 391 ntBASIC23.31■■□□□ 1.32
SSH3Q8TE77 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 MIR3180-5-201ENST00000583743 153 ntBASIC23.31■■□□□ 1.32
SSH3Q8TE77 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 AL138966.2-201ENST00000621997 464 ntBASIC23.31■■□□□ 1.32
SSH3Q8TE77 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 AL357033.4-201ENST00000617703 1807 ntBASIC23.31■■□□□ 1.32
SSH3Q8TE77 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSH3Q8TE77 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
SSH3Q8TE77 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SSH3Q8TE77 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSH3Q8TE77 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 TERF1P1-201ENST00000311003 1181 ntBASIC23.29■■□□□ 1.32
SSH3Q8TE77 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 MIR564-202ENST00000385049 94 ntBASIC23.29■■□□□ 1.32
SSH3Q8TE77 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 AC036111.1-201ENST00000533973 1582 ntBASIC23.29■■□□□ 1.32
SSH3Q8TE77 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.29■■□□□ 1.32
SSH3Q8TE77 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.29■■□□□ 1.32
SSH3Q8TE77 AC005363.2-201ENST00000618631 242 ntBASIC23.29■■□□□ 1.32
SSH3Q8TE77 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SSH3Q8TE77 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 AC093503.3-201ENST00000624917 2352 ntBASIC23.28■■□□□ 1.32
SSH3Q8TE77 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SSH3Q8TE77 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SSH3Q8TE77 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms