Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC6AQ8NDV7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNRC6AQ8NDV7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TNRC6AQ8NDV7 AL022342.1-201ENST00000400363 863 ntBASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 AL023284.2-201ENST00000405850 579 ntBASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 DRAXINP1-201ENST00000437611 948 ntBASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 KRT18P1-202ENST00000452408 1331 ntBASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 MCCD1P1-208ENST00000445732 328 ntBASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
TNRC6AQ8NDV7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 MIR3917-201ENST00000580971 93 ntBASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 AC138894.3-201ENST00000603787 634 ntBASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 LINC00265-3P-201ENST00000447588 903 ntBASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.19■□□□□ 0.34
TNRC6AQ8NDV7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 AP000867.3-201ENST00000524675 377 ntBASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 AC104692.2-201ENST00000603054 253 ntBASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.18■□□□□ 0.34
TNRC6AQ8NDV7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TNRC6AQ8NDV7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms