Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 AC008556.1-201ENST00000610908 2040 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 AL137013.1-201ENST00000432946 1228 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 MCCD1P1-208ENST00000445732 328 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 AL138966.2-201ENST00000621997 464 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 CR769767.2-201ENST00000622735 460 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 AL109659.2-201ENST00000606809 1674 ntBASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 HEIH-201ENST00000623091 1652 ntBASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 KRT18P57-201ENST00000443599 1254 ntBASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 AC083906.6-201ENST00000641366 219 ntBASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC01555Q8NAE3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 AC036111.1-201ENST00000533973 1582 ntBASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 AC098818.2-201ENST00000564925 2320 ntBASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01555Q8NAE3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
LINC01555Q8NAE3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC01555Q8NAE3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC01555Q8NAE3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.14■□□□□ 0.5
LINC01555Q8NAE3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms