Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 TSPY21P-201ENST00000433481 731 ntBASIC19.61■□□□□ 0.73
CCDC89Q8N998 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 AL160286.2-201ENST00000567150 934 ntBASIC19.61■□□□□ 0.73
CCDC89Q8N998 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC89Q8N998 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC89Q8N998 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 C1QL1P1-201ENST00000568105 661 ntBASIC19.6■□□□□ 0.73
CCDC89Q8N998 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC89Q8N998 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC89Q8N998 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 AP003097.1-201ENST00000530657 1135 ntBASIC19.59■□□□□ 0.73
CCDC89Q8N998 HLA-A-209ENST00000638375 975 ntBASIC19.59■□□□□ 0.73
CCDC89Q8N998 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC89Q8N998 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC89Q8N998 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC89Q8N998 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC89Q8N998 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC89Q8N998 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC89Q8N998 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC89Q8N998 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC89Q8N998 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms