Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 TERF1P1-201ENST00000311003 1181 ntBASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 AC005521.1-201ENST00000393351 872 ntBASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 KRT18P21-201ENST00000515767 1272 ntBASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 AC092865.7-201ENST00000641832 219 ntBASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDH20Q8N6Y1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 TEX21P-204ENST00000641479 1693 ntBASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH20Q8N6Y1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH20Q8N6Y1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 LIN28AP1-201ENST00000429574 405 ntBASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH20Q8N6Y1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 AC073508.3-201ENST00000619697 1419 ntBASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH20Q8N6Y1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms