Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.79■□□□□ 0.92
NME8Q8N427 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.79■□□□□ 0.92
NME8Q8N427 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.79■□□□□ 0.92
NME8Q8N427 VENTXP5-201ENST00000523979 775 ntBASIC20.79■□□□□ 0.92
NME8Q8N427 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.79■□□□□ 0.92
NME8Q8N427 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.79■□□□□ 0.92
NME8Q8N427 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 AC007952.6-201ENST00000573168 2673 ntBASIC20.79■□□□□ 0.92
NME8Q8N427 AC003957.1-201ENST00000625108 2673 ntBASIC20.79■□□□□ 0.92
NME8Q8N427 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.78■□□□□ 0.92
NME8Q8N427 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.78■□□□□ 0.92
NME8Q8N427 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NME8Q8N427 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.78■□□□□ 0.92
NME8Q8N427 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
NME8Q8N427 AC083849.1-201ENST00000615227 514 ntBASIC20.78■□□□□ 0.92
NME8Q8N427 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.78■□□□□ 0.92
NME8Q8N427 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NME8Q8N427 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
NME8Q8N427 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME8Q8N427 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NME8Q8N427 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.77■□□□□ 0.92
NME8Q8N427 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NME8Q8N427 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NME8Q8N427 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 SPDYE15P-201ENST00000424157 909 ntBASIC20.77■□□□□ 0.92
NME8Q8N427 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.77■□□□□ 0.92
NME8Q8N427 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.77■□□□□ 0.92
NME8Q8N427 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.77■□□□□ 0.92
NME8Q8N427 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.77■□□□□ 0.92
NME8Q8N427 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.77■□□□□ 0.92
NME8Q8N427 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.77■□□□□ 0.92
NME8Q8N427 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME8Q8N427 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NME8Q8N427 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
NME8Q8N427 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NME8Q8N427 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.77■□□□□ 0.91
NME8Q8N427 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME8Q8N427 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME8Q8N427 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.76■□□□□ 0.91
NME8Q8N427 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms