Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.57■□□□□ 0.4
DEPDC4Q8N2C3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.56■□□□□ 0.4
DEPDC4Q8N2C3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 UNC93B4-201ENST00000505679 747 ntBASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 AP006294.2-201ENST00000641667 209 ntBASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.55■□□□□ 0.4
DEPDC4Q8N2C3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 AC128676.1-201ENST00000454392 318 ntBASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DEPDC4Q8N2C3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms