Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AC120498.9-201ENST00000339021 3867 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AC009237.14-201ENST00000609975 1594 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RBM17P1-201ENST00000453646 1190 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 KRT18P35-201ENST00000510488 1269 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 NUDT16P1-203ENST00000513809 620 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AP000525.1-201ENST00000608286 694 ntBASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00528Q8N1L1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 MIR1238-201ENST00000408483 83 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AC022784.5-201ENST00000522241 437 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 BNIP3P35-201ENST00000604530 490 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AC145285.6-201ENST00000604632 637 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AL031963.3-201ENST00000606441 850 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AC097478.2-201ENST00000610572 514 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AL590326.2-201ENST00000625139 305 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 AC092865.7-201ENST00000641832 219 ntBASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00528Q8N1L1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms