Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC170Q8IYT3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 NCF1B-203ENST00000435988 1254 ntBASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC170Q8IYT3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 AC083880.1-201ENST00000608266 535 ntBASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC170Q8IYT3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 C1QL1P1-201ENST00000568105 661 ntBASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 RCC2P6-201ENST00000526625 1557 ntBASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC170Q8IYT3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC170Q8IYT3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms