Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.87■□□□□ 0.77
SCUBE3Q8IX30 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCUBE3Q8IX30 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 AL512353.2-201ENST00000448759 1962 ntBASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 TSPY17P-201ENST00000450329 467 ntBASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 EGLN1P1-201ENST00000531623 762 ntBASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 AL353719.1-201ENST00000566847 864 ntBASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 BX323043.1-201ENST00000641006 1765 ntBASIC19.85■□□□□ 0.77
SCUBE3Q8IX30 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 LINC01568-207ENST00000641790 1380 ntBASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 CCR12P-201ENST00000446203 998 ntBASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 AC116562.4-202ENST00000641738 218 ntBASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 AC092338.2-201ENST00000568827 1415 ntBASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCUBE3Q8IX30 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 AC007663.1-201ENST00000438948 1240 ntBASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 AP003041.3-201ENST00000527151 707 ntBASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SCUBE3Q8IX30 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms