Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 Z98044.1-201ENST00000632503 1764 ntBASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00346Q8IVM7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AC093525.10-201ENST00000625130 1569 ntBASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AC090340.1-201ENST00000620778 4980 ntBASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AP002982.1-201ENST00000492365 877 ntBASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00346Q8IVM7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 NIFKP9-201ENST00000419265 221 ntBASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 RPS2P4-201ENST00000476944 856 ntBASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 AL445675.2-201ENST00000620291 557 ntBASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 AC009113.1-201ENST00000570267 2443 ntBASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00346Q8IVM7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 RPPH1-201ENST00000516869 333 ntBASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 AC131212.4-201ENST00000623606 975 ntBASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 AC083906.6-201ENST00000641366 219 ntBASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00346Q8IVM7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
LINC00346Q8IVM7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms