Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 AC108860.2-201ENST00000562760 2183 ntBASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 AC087633.2-202ENST00000565166 1439 ntBASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 CCDC92B-201ENST00000575506 885 ntBASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CROCCP3Q8IVE0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AC131281.2-201ENST00000520478 145 ntBASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AC024257.2-201ENST00000549699 147 ntBASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 AL035685.1-201ENST00000636663 812 ntBASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CROCCP3Q8IVE0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 AL354811.1-201ENST00000610286 706 ntBASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 RBM17P2-201ENST00000616397 1405 ntBASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms