Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 AC126763.1-201ENST00000552015 2118 ntBASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.78■□□□□ 0.6
NUDCD3Q8IVD9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 AP000997.3-201ENST00000623333 2250 ntBASIC18.77■□□□□ 0.6
NUDCD3Q8IVD9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NUDCD3Q8IVD9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD3Q8IVD9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 FZD10-202ENST00000539839 3282 ntBASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD3Q8IVD9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms