Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK2Q86Y07 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK2Q86Y07 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK2Q86Y07 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK2Q86Y07 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.47■□□□□ 0.39
VRK2Q86Y07 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 AL353708.3-201ENST00000610272 989 ntBASIC17.47■□□□□ 0.39
VRK2Q86Y07 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK2Q86Y07 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK2Q86Y07 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 KSR1P1-201ENST00000446298 240 ntBASIC17.46■□□□□ 0.39
VRK2Q86Y07 AC091390.4-202ENST00000476426 537 ntBASIC17.46■□□□□ 0.39
VRK2Q86Y07 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 AC090164.3-201ENST00000610780 2143 ntBASIC17.46■□□□□ 0.39
VRK2Q86Y07 CR392000.1-201ENST00000624770 1228 ntBASIC17.46■□□□□ 0.39
VRK2Q86Y07 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK2Q86Y07 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.46■□□□□ 0.39
VRK2Q86Y07 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VRK2Q86Y07 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.46■□□□□ 0.38
VRK2Q86Y07 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 RCC2P6-201ENST00000526625 1557 ntBASIC17.45■□□□□ 0.38
VRK2Q86Y07 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 TSPY20P-201ENST00000450910 630 ntBASIC17.45■□□□□ 0.38
VRK2Q86Y07 FAM201B-201ENST00000458407 597 ntBASIC17.45■□□□□ 0.38
VRK2Q86Y07 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 AL359736.2-201ENST00000621992 437 ntBASIC17.45■□□□□ 0.38
VRK2Q86Y07 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK2Q86Y07 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.45■□□□□ 0.38
VRK2Q86Y07 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms