Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 TMEM191A-211ENST00000637163 1067 ntBASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF111Q6ZNA4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 PRORSD1P-201ENST00000295112 541 ntBASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 C1QBPP2-201ENST00000528754 825 ntBASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 AL023875.1-201ENST00000640777 796 ntBASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 AC106820.2-201ENST00000563775 3264 ntBASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF111Q6ZNA4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF111Q6ZNA4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 AP006587.1-201ENST00000534129 1502 ntBASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF111Q6ZNA4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 KRASP1-201ENST00000407852 552 ntBASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF111Q6ZNA4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms