Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 KSR1P1-201ENST00000446298 240 ntBASIC19.09■□□□□ 0.65
PACS1Q6VY07 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 AP002982.1-201ENST00000492365 877 ntBASIC19.09■□□□□ 0.65
PACS1Q6VY07 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 AL160286.2-201ENST00000567150 934 ntBASIC19.09■□□□□ 0.65
PACS1Q6VY07 AF186192.3-201ENST00000583427 947 ntBASIC19.09■□□□□ 0.65
PACS1Q6VY07 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.09■□□□□ 0.65
PACS1Q6VY07 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PACS1Q6VY07 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.08■□□□□ 0.65
PACS1Q6VY07 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
PACS1Q6VY07 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.08■□□□□ 0.65
PACS1Q6VY07 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PACS1Q6VY07 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PACS1Q6VY07 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PACS1Q6VY07 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PACS1Q6VY07 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PACS1Q6VY07 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PACS1Q6VY07 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AC135050.7-201ENST00000624508 2218 ntBASIC19.07■□□□□ 0.64
PACS1Q6VY07 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PACS1Q6VY07 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PACS1Q6VY07 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 ANO7L1-203ENST00000602586 1720 ntBASIC19.06■□□□□ 0.64
PACS1Q6VY07 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.06■□□□□ 0.64
PACS1Q6VY07 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACS1Q6VY07 TSPY21P-201ENST00000433481 731 ntBASIC19.06■□□□□ 0.64
PACS1Q6VY07 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.06■□□□□ 0.64
PACS1Q6VY07 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms