Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 FAM87A-204ENST00000613235 858 ntBASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 AC113347.1-201ENST00000413321 391 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 SLC25A1P2-201ENST00000430693 912 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 KRT18P57-201ENST00000443599 1254 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 RN7SL850P-201ENST00000579959 291 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 AL023803.3-201ENST00000615559 522 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 AC116562.4-202ENST00000641738 218 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 AC093484.2-201ENST00000580996 2166 ntBASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RFWD3Q6PCD5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 TSPY21P-201ENST00000433481 731 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC007663.1-201ENST00000438948 1240 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 CCR12P-201ENST00000446203 998 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC128688.1-201ENST00000487626 519 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC010203.1-204ENST00000548782 407 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 AC007613.1-201ENST00000572811 2597 ntBASIC19.67■□□□□ 0.74
RFWD3Q6PCD5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 TERF1P1-201ENST00000311003 1181 ntBASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 AC092338.2-201ENST00000568827 1415 ntBASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RFWD3Q6PCD5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.65■□□□□ 0.74
RFWD3Q6PCD5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms