Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 SEC1P-202ENST00000473944 940 ntBASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 AFG3L1P-217ENST00000557444 2447 ntBASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNFT1Q5M7Z0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 AC069148.1-201ENST00000608741 768 ntBASIC17■□□□□ 0.31
RNFT1Q5M7Z0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 AL512353.2-201ENST00000448759 1962 ntBASIC17■□□□□ 0.31
RNFT1Q5M7Z0 RCC2P3-201ENST00000418112 1537 ntBASIC17■□□□□ 0.31
RNFT1Q5M7Z0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17■□□□□ 0.31
RNFT1Q5M7Z0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AC008556.1-201ENST00000610908 2040 ntBASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 IRX1P1-201ENST00000438849 1838 ntBASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AC034232.1-201ENST00000506026 1064 ntBASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNFT1Q5M7Z0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNFT1Q5M7Z0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms