Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.15■□□□□ 0.5
PDCD4Q53EL6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 HLA-A-209ENST00000638375 975 ntBASIC18.15■□□□□ 0.5
PDCD4Q53EL6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 AC020763.4-201ENST00000623414 4170 ntBASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD4Q53EL6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDCD4Q53EL6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ABALON-201ENST00000629058 1903 ntBASIC18.14■□□□□ 0.49
PDCD4Q53EL6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD4Q53EL6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.13■□□□□ 0.49
PDCD4Q53EL6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 C1QL1P1-201ENST00000568105 661 ntBASIC18.13■□□□□ 0.49
PDCD4Q53EL6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms