Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN20Q4JDL3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 CA15P1-201ENST00000481698 905 ntBASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN20Q4JDL3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 KRT8P9-201ENST00000558927 1449 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 AL138781.2-201ENST00000617896 1843 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 Z98044.1-201ENST00000632503 1764 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 RNF165-205ENST00000588679 2904 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 RCC2P3-201ENST00000418112 1537 ntBASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN20Q4JDL3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 ANO7L1-203ENST00000602586 1720 ntBASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTPN20Q4JDL3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms