Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 AC104390.1-201ENST00000555663 520 ntBASIC22.67■■□□□ 1.22
PDS5AQ29RF7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 AFG3L1P-217ENST00000557444 2447 ntBASIC22.66■■□□□ 1.22
PDS5AQ29RF7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.66■■□□□ 1.22
PDS5AQ29RF7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 MIR3180-4-201ENST00000582223 153 ntBASIC22.65■■□□□ 1.22
PDS5AQ29RF7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDS5AQ29RF7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 AC034236.2-201ENST00000606662 1610 ntBASIC22.64■■□□□ 1.22
PDS5AQ29RF7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 HLA-F-220ENST00000434407 884 ntBASIC22.64■■□□□ 1.22
PDS5AQ29RF7 KRT18P23-201ENST00000435622 1283 ntBASIC22.64■■□□□ 1.22
PDS5AQ29RF7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 AC092597.1-201ENST00000487352 616 ntBASIC22.64■■□□□ 1.22
PDS5AQ29RF7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDS5AQ29RF7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PDS5AQ29RF7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.63■■□□□ 1.21
PDS5AQ29RF7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 AC010240.3-201ENST00000607688 395 ntBASIC22.62■■□□□ 1.21
PDS5AQ29RF7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 AL157888.1-201ENST00000631930 593 ntBASIC22.62■■□□□ 1.21
PDS5AQ29RF7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms