Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CDH17Q12864 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH17Q12864 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH17Q12864 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 GCSHP5-201ENST00000443090 522 ntBASIC19.09■□□□□ 0.65
CDH17Q12864 FAM207BP-201ENST00000447172 505 ntBASIC19.09■□□□□ 0.65
CDH17Q12864 UBE2SP1-201ENST00000450587 669 ntBASIC19.09■□□□□ 0.65
CDH17Q12864 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH17Q12864 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH17Q12864 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH17Q12864 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH17Q12864 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH17Q12864 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH17Q12864 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH17Q12864 FSCN1P1-201ENST00000568912 1481 ntBASIC19.09■□□□□ 0.65
CDH17Q12864 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH17Q12864 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CDH17Q12864 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH17Q12864 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH17Q12864 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH17Q12864 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH17Q12864 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDH17Q12864 HEIH-201ENST00000623091 1652 ntBASIC19.08■□□□□ 0.65
CDH17Q12864 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH17Q12864 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CDH17Q12864 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.65
CDH17Q12864 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH17Q12864 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH17Q12864 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH17Q12864 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH17Q12864 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH17Q12864 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 FAM197Y1-201ENST00000421178 764 ntBASIC19.08■□□□□ 0.64
CDH17Q12864 AC008040.2-201ENST00000461049 708 ntBASIC19.08■□□□□ 0.64
CDH17Q12864 AC011506.1-201ENST00000474329 610 ntBASIC19.08■□□□□ 0.64
CDH17Q12864 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH17Q12864 CKBP1-201ENST00000565489 1086 ntBASIC19.08■□□□□ 0.64
CDH17Q12864 CD177P1-201ENST00000606252 935 ntBASIC19.08■□□□□ 0.64
CDH17Q12864 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDH17Q12864 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH17Q12864 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDH17Q12864 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH17Q12864 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH17Q12864 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH17Q12864 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH17Q12864 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH17Q12864 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CDH17Q12864 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH17Q12864 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH17Q12864 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH17Q12864 AL158047.1-201ENST00000445918 881 ntBASIC19.07■□□□□ 0.64
CDH17Q12864 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDH17Q12864 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH17Q12864 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH17Q12864 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
CDH17Q12864 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH17Q12864 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH17Q12864 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH17Q12864 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH17Q12864 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CDH17Q12864 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH17Q12864 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDH17Q12864 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH17Q12864 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH17Q12864 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH17Q12864 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH17Q12864 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH17Q12864 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms