Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST1H1AQ02539 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HIST1H1AQ02539 TEX21P-204ENST00000641479 1693 ntBASIC14.46□□□□□ -0.1
HIST1H1AQ02539 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 TUBB8P6-201ENST00000436895 1288 ntBASIC14.45□□□□□ -0.1
HIST1H1AQ02539 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 AL121829.2-201ENST00000620908 328 ntBASIC14.45□□□□□ -0.1
HIST1H1AQ02539 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 AC141586.3-201ENST00000562166 1838 ntBASIC14.45□□□□□ -0.1
HIST1H1AQ02539 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 AC018470.1-201ENST00000624790 3129 ntBASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HIST1H1AQ02539 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 AL161938.1-201ENST00000569833 2180 ntBASIC14.44□□□□□ -0.1
HIST1H1AQ02539 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 AL390961.4-201ENST00000623958 2535 ntBASIC14.44□□□□□ -0.1
HIST1H1AQ02539 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.44□□□□□ -0.1
HIST1H1AQ02539 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1AQ02539 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms