Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 AC105020.1-201ENST00000435356 2205 ntBASIC14.28□□□□□ -0.12
HIST1H2BCP62807 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 LINC00602-201ENST00000629776 2065 ntBASIC14.28□□□□□ -0.12
HIST1H2BCP62807 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H2BCP62807 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2BCP62807 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 RARRES2P11-201ENST00000635158 484 ntBASIC14.27□□□□□ -0.13
HIST1H2BCP62807 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2BCP62807 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BCP62807 AC010525.1-201ENST00000585559 441 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms