Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.29■□□□□ 0.36
CDC42P60953 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.29■□□□□ 0.36
CDC42P60953 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDC42P60953 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC42P60953 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.29■□□□□ 0.36
CDC42P60953 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDC42P60953 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CDC42P60953 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDC42P60953 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC42P60953 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDC42P60953 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDC42P60953 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC42P60953 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42P60953 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.29■□□□□ 0.36
CDC42P60953 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDC42P60953 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CDC42P60953 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDC42P60953 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.28■□□□□ 0.36
CDC42P60953 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.28■□□□□ 0.36
CDC42P60953 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.28■□□□□ 0.36
CDC42P60953 AC005829.2-201ENST00000571422 1056 ntBASIC17.28■□□□□ 0.36
CDC42P60953 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC42P60953 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDC42P60953 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42P60953 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC42P60953 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC42P60953 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC42P60953 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.27■□□□□ 0.36
CDC42P60953 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 AC093787.1-201ENST00000450396 207 ntBASIC17.27■□□□□ 0.36
CDC42P60953 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.27■□□□□ 0.36
CDC42P60953 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42P60953 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDC42P60953 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC42P60953 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.27■□□□□ 0.35
CDC42P60953 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDC42P60953 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDC42P60953 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDC42P60953 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
CDC42P60953 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42P60953 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDC42P60953 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 AC126763.1-201ENST00000552015 2118 ntBASIC17.26■□□□□ 0.35
CDC42P60953 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDC42P60953 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42P60953 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.26■□□□□ 0.35
CDC42P60953 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.26■□□□□ 0.35
CDC42P60953 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42P60953 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42P60953 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.26■□□□□ 0.35
CDC42P60953 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42P60953 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.26■□□□□ 0.35
CDC42P60953 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms