Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CHMP4BP1P59074 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP4BP1P59074 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 UPK3BP1-201ENST00000428678 509 ntBASIC21.55■■□□□ 1.04
CHMP4BP1P59074 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP4BP1P59074 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 COX11P1-201ENST00000489116 835 ntBASIC21.54■■□□□ 1.04
CHMP4BP1P59074 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 AL138966.2-201ENST00000621997 464 ntBASIC21.54■■□□□ 1.04
CHMP4BP1P59074 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP4BP1P59074 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 AC141257.4-201ENST00000634557 245 ntBASIC21.53■■□□□ 1.04
CHMP4BP1P59074 AC136944.6-201ENST00000634818 245 ntBASIC21.53■■□□□ 1.04
CHMP4BP1P59074 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CHMP4BP1P59074 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 TSPY5P-201ENST00000426936 936 ntBASIC21.52■■□□□ 1.04
CHMP4BP1P59074 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 TSPY17P-201ENST00000450329 467 ntBASIC21.52■■□□□ 1.04
CHMP4BP1P59074 AC011558.1-201ENST00000623459 338 ntBASIC21.52■■□□□ 1.04
CHMP4BP1P59074 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 AC092338.2-201ENST00000568827 1415 ntBASIC21.52■■□□□ 1.04
CHMP4BP1P59074 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CHMP4BP1P59074 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms