Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S2P56377 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S2P56377 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S2P56377 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
AP1S2P56377 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AP1S2P56377 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AP1S2P56377 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
AP1S2P56377 HEIH-201ENST00000623091 1652 ntBASIC18.39■□□□□ 0.53
AP1S2P56377 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.39■□□□□ 0.53
AP1S2P56377 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S2P56377 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.39■□□□□ 0.53
AP1S2P56377 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.39■□□□□ 0.53
AP1S2P56377 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S2P56377 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S2P56377 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 MIR4785-201ENST00000585005 73 ntBASIC18.39■□□□□ 0.53
AP1S2P56377 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S2P56377 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.39■□□□□ 0.53
AP1S2P56377 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
AP1S2P56377 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S2P56377 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
AP1S2P56377 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S2P56377 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S2P56377 KRT8P32-201ENST00000512863 1461 ntBASIC18.39■□□□□ 0.53
AP1S2P56377 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
AP1S2P56377 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
AP1S2P56377 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 MFAP1P1-201ENST00000442257 1255 ntBASIC18.38■□□□□ 0.53
AP1S2P56377 AC097488.1-201ENST00000507834 756 ntBASIC18.38■□□□□ 0.53
AP1S2P56377 AP003071.4-201ENST00000562276 1284 ntBASIC18.38■□□□□ 0.53
AP1S2P56377 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
AP1S2P56377 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S2P56377 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.38■□□□□ 0.53
AP1S2P56377 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP1S2P56377 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S2P56377 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
AP1S2P56377 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S2P56377 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 AL020996.1-203ENST00000536896 2307 ntBASIC18.37■□□□□ 0.53
AP1S2P56377 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S2P56377 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.37■□□□□ 0.53
AP1S2P56377 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
AP1S2P56377 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S2P56377 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.37■□□□□ 0.53
AP1S2P56377 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.37■□□□□ 0.53
AP1S2P56377 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP1S2P56377 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S2P56377 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S2P56377 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
AP1S2P56377 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms