Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXG1P55316 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 TMPOP1-202ENST00000424642 1267 ntBASIC16.56■□□□□ 0.24
FOXG1P55316 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.56■□□□□ 0.24
FOXG1P55316 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXG1P55316 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FOXG1P55316 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXG1P55316 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXG1P55316 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXG1P55316 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXG1P55316 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 RCC2P3-201ENST00000418112 1537 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
FOXG1P55316 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXG1P55316 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXG1P55316 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FOXG1P55316 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 LIN28AP1-201ENST00000429574 405 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXG1P55316 ATP5G1P1-201ENST00000448724 379 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 AC104076.2-201ENST00000448912 469 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 CR769767.2-201ENST00000622735 460 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 AC092865.7-201ENST00000641832 219 ntBASIC16.55■□□□□ 0.24
FOXG1P55316 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXG1P55316 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXG1P55316 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FOXG1P55316 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXG1P55316 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
FOXG1P55316 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 AC120498.9-201ENST00000339021 3867 ntBASIC16.54■□□□□ 0.24
FOXG1P55316 AC008556.1-201ENST00000610908 2040 ntBASIC16.54■□□□□ 0.24
FOXG1P55316 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FOXG1P55316 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXG1P55316 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXG1P55316 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXG1P55316 AC006011.2-201ENST00000621313 1158 ntBASIC16.54■□□□□ 0.24
FOXG1P55316 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXG1P55316 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.54■□□□□ 0.24
FOXG1P55316 KRT8P32-201ENST00000512863 1461 ntBASIC16.54■□□□□ 0.24
FOXG1P55316 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXG1P55316 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXG1P55316 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
FOXG1P55316 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FOXG1P55316 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXG1P55316 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXG1P55316 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXG1P55316 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXG1P55316 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXG1P55316 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXG1P55316 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXG1P55316 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXG1P55316 AC036111.1-201ENST00000533973 1582 ntBASIC16.53■□□□□ 0.24
FOXG1P55316 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXG1P55316 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms