Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB4P54760 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB4P54760 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB4P54760 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
EPHB4P54760 SPDYE13P-201ENST00000445314 798 ntBASIC21.22■□□□□ 0.99
EPHB4P54760 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHB4P54760 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
EPHB4P54760 DPP3P2-201ENST00000416030 1696 ntBASIC21.21■□□□□ 0.99
EPHB4P54760 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHB4P54760 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB4P54760 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHB4P54760 UNC93B7-201ENST00000509439 705 ntBASIC21.21■□□□□ 0.99
EPHB4P54760 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.21■□□□□ 0.99
EPHB4P54760 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB4P54760 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
EPHB4P54760 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
EPHB4P54760 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB4P54760 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
EPHB4P54760 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
EPHB4P54760 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHB4P54760 LINC01311-201ENST00000565162 1445 ntBASIC21.21■□□□□ 0.99
EPHB4P54760 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHB4P54760 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.2■□□□□ 0.99
EPHB4P54760 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB4P54760 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.2■□□□□ 0.98
EPHB4P54760 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 CA15P1-201ENST00000481698 905 ntBASIC21.2■□□□□ 0.98
EPHB4P54760 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.2■□□□□ 0.98
EPHB4P54760 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB4P54760 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB4P54760 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHB4P54760 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHB4P54760 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
EPHB4P54760 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHB4P54760 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHB4P54760 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHB4P54760 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.19■□□□□ 0.98
EPHB4P54760 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.19■□□□□ 0.98
EPHB4P54760 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.19■□□□□ 0.98
EPHB4P54760 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
EPHB4P54760 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHB4P54760 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EPHB4P54760 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.19■□□□□ 0.98
EPHB4P54760 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHB4P54760 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHB4P54760 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHB4P54760 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
EPHB4P54760 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.18■□□□□ 0.98
EPHB4P54760 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHB4P54760 GCSHP2-201ENST00000560971 527 ntBASIC21.18■□□□□ 0.98
EPHB4P54760 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.18■□□□□ 0.98
EPHB4P54760 CR769767.2-201ENST00000622735 460 ntBASIC21.18■□□□□ 0.98
EPHB4P54760 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
EPHB4P54760 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
EPHB4P54760 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHB4P54760 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHB4P54760 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 KRT16P6-202ENST00000425692 1426 ntBASIC21.18■□□□□ 0.98
EPHB4P54760 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EPHB4P54760 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EPHB4P54760 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHB4P54760 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHB4P54760 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHB4P54760 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHB4P54760 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 STARP1-201ENST00000397973 869 ntBASIC21.17■□□□□ 0.98
EPHB4P54760 SPDYE15P-201ENST00000424157 909 ntBASIC21.17■□□□□ 0.98
EPHB4P54760 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms