Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
LBX1P52954 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.37■■□□□ 1.01
LBX1P52954 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.37■■□□□ 1.01
LBX1P52954 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.37■■□□□ 1.01
LBX1P52954 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LBX1P52954 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.36■■□□□ 1.01
LBX1P52954 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 AL049796.1-201ENST00000565336 1766 ntBASIC21.36■■□□□ 1.01
LBX1P52954 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LBX1P52954 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.36■■□□□ 1.01
LBX1P52954 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 AC190387.1-201ENST00000551683 408 ntBASIC21.36■■□□□ 1.01
LBX1P52954 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.36■■□□□ 1.01
LBX1P52954 AC005336.2-201ENST00000593183 939 ntBASIC21.36■■□□□ 1.01
LBX1P52954 AF228730.6-201ENST00000641497 218 ntBASIC21.36■■□□□ 1.01
LBX1P52954 AC084121.3-201ENST00000641716 218 ntBASIC21.36■■□□□ 1.01
LBX1P52954 AC105233.6-201ENST00000642093 218 ntBASIC21.36■■□□□ 1.01
LBX1P52954 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.36■■□□□ 1.01
LBX1P52954 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.36■■□□□ 1.01
LBX1P52954 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.36■■□□□ 1.01
LBX1P52954 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.36■■□□□ 1.01
LBX1P52954 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LBX1P52954 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LBX1P52954 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.35■■□□□ 1.01
LBX1P52954 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
LBX1P52954 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.35■■□□□ 1.01
LBX1P52954 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.35■■□□□ 1.01
LBX1P52954 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.35■■□□□ 1.01
LBX1P52954 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.35■■□□□ 1.01
LBX1P52954 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.35■■□□□ 1.01
LBX1P52954 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.35■■□□□ 1.01
LBX1P52954 AC104390.1-201ENST00000555663 520 ntBASIC21.35■■□□□ 1.01
LBX1P52954 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.35■■□□□ 1.01
LBX1P52954 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.35■■□□□ 1.01
LBX1P52954 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.35■■□□□ 1.01
LBX1P52954 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LBX1P52954 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.35■■□□□ 1.01
LBX1P52954 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LBX1P52954 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.34■■□□□ 1.01
LBX1P52954 MCCD1P2-201ENST00000423228 335 ntBASIC21.34■■□□□ 1.01
LBX1P52954 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.34■■□□□ 1.01
LBX1P52954 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
LBX1P52954 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.34■■□□□ 1.01
LBX1P52954 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LBX1P52954 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LBX1P52954 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.33■■□□□ 1.01
LBX1P52954 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LBX1P52954 ALG1L5P-201ENST00000482043 771 ntBASIC21.33■■□□□ 1.01
LBX1P52954 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LBX1P52954 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.33■■□□□ 1.01
LBX1P52954 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.33■■□□□ 1.01
LBX1P52954 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.33■■□□□ 1.01
LBX1P52954 AC024563.2-201ENST00000603282 481 ntBASIC21.33■■□□□ 1.01
LBX1P52954 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LBX1P52954 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.33■■□□□ 1.01
LBX1P52954 FEM1AP1-201ENST00000431297 1995 ntBASIC21.33■■□□□ 1.01
LBX1P52954 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.33■■□□□ 1.01
LBX1P52954 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LBX1P52954 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LBX1P52954 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.32■■□□□ 1
LBX1P52954 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LBX1P52954 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms