Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.34■□□□□ 0.53
PDX1P52945 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.34■□□□□ 0.53
PDX1P52945 AC112907.2-201ENST00000448639 330 ntBASIC18.34■□□□□ 0.53
PDX1P52945 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.34■□□□□ 0.53
PDX1P52945 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDX1P52945 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.34■□□□□ 0.53
PDX1P52945 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.34■□□□□ 0.53
PDX1P52945 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.34■□□□□ 0.53
PDX1P52945 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PDX1P52945 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDX1P52945 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.34■□□□□ 0.53
PDX1P52945 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
PDX1P52945 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.33■□□□□ 0.53
PDX1P52945 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDX1P52945 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PDX1P52945 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDX1P52945 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDX1P52945 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.33■□□□□ 0.53
PDX1P52945 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDX1P52945 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.33■□□□□ 0.53
PDX1P52945 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDX1P52945 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PDX1P52945 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 SPDYE15P-201ENST00000424157 909 ntBASIC18.33■□□□□ 0.52
PDX1P52945 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.33■□□□□ 0.52
PDX1P52945 GCSHP2-201ENST00000560971 527 ntBASIC18.33■□□□□ 0.52
PDX1P52945 AL136038.3-201ENST00000561909 1096 ntBASIC18.33■□□□□ 0.52
PDX1P52945 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 NEK4P2-201ENST00000580004 1012 ntBASIC18.33■□□□□ 0.52
PDX1P52945 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.33■□□□□ 0.52
PDX1P52945 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.33■□□□□ 0.52
PDX1P52945 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDX1P52945 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.33■□□□□ 0.52
PDX1P52945 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
PDX1P52945 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.32■□□□□ 0.52
PDX1P52945 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PDX1P52945 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.32■□□□□ 0.52
PDX1P52945 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 AP000523.1-201ENST00000398242 1049 ntBASIC18.32■□□□□ 0.52
PDX1P52945 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
PDX1P52945 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.32■□□□□ 0.52
PDX1P52945 HCG4P8-203ENST00000443049 980 ntBASIC18.32■□□□□ 0.52
PDX1P52945 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.32■□□□□ 0.52
PDX1P52945 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.32■□□□□ 0.52
PDX1P52945 VENTXP5-201ENST00000523979 775 ntBASIC18.32■□□□□ 0.52
PDX1P52945 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.32■□□□□ 0.52
PDX1P52945 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.32■□□□□ 0.52
PDX1P52945 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.32■□□□□ 0.52
PDX1P52945 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDX1P52945 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
PDX1P52945 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDX1P52945 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDX1P52945 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDX1P52945 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PDX1P52945 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.31■□□□□ 0.52
PDX1P52945 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
PDX1P52945 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
PDX1P52945 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDX1P52945 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms