Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GTF2A1P52655 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
GTF2A1P52655 AC023824.1-201ENST00000562945 2975 ntBASIC18.56■□□□□ 0.56
GTF2A1P52655 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GTF2A1P52655 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GTF2A1P52655 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GTF2A1P52655 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GTF2A1P52655 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.56■□□□□ 0.56
GTF2A1P52655 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.55■□□□□ 0.56
GTF2A1P52655 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 AP006587.3-201ENST00000525742 1516 ntBASIC18.55■□□□□ 0.56
GTF2A1P52655 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GTF2A1P52655 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GTF2A1P52655 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GTF2A1P52655 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.55■□□□□ 0.56
GTF2A1P52655 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.55■□□□□ 0.56
GTF2A1P52655 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GTF2A1P52655 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
GTF2A1P52655 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.54■□□□□ 0.56
GTF2A1P52655 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GTF2A1P52655 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.54■□□□□ 0.56
GTF2A1P52655 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GTF2A1P52655 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
GTF2A1P52655 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
GTF2A1P52655 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
GTF2A1P52655 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.53■□□□□ 0.56
GTF2A1P52655 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 DOC2GP-204ENST00000639052 2548 ntBASIC18.53■□□□□ 0.56
GTF2A1P52655 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.53■□□□□ 0.56
GTF2A1P52655 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 AL356740.2-201ENST00000601559 647 ntBASIC18.53■□□□□ 0.56
GTF2A1P52655 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.53■□□□□ 0.56
GTF2A1P52655 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GTF2A1P52655 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
GTF2A1P52655 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
GTF2A1P52655 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
GTF2A1P52655 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 AC093525.10-201ENST00000625130 1569 ntBASIC18.52■□□□□ 0.56
GTF2A1P52655 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GTF2A1P52655 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.52■□□□□ 0.56
GTF2A1P52655 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.52■□□□□ 0.56
GTF2A1P52655 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms