Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CLCN3P51790 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN3P51790 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CLCN3P51790 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CLCN3P51790 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLCN3P51790 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN3P51790 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLCN3P51790 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 UPK3BP1-201ENST00000428678 509 ntBASIC20.77■□□□□ 0.92
CLCN3P51790 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.77■□□□□ 0.92
CLCN3P51790 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN3P51790 AC083849.1-201ENST00000615227 514 ntBASIC20.77■□□□□ 0.92
CLCN3P51790 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN3P51790 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN3P51790 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN3P51790 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN3P51790 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.77■□□□□ 0.91
CLCN3P51790 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN3P51790 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 FP475955.4-201ENST00000623131 1990 ntBASIC20.76■□□□□ 0.91
CLCN3P51790 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN3P51790 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.76■□□□□ 0.91
CLCN3P51790 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
CLCN3P51790 PCED1CP-201ENST00000419887 785 ntBASIC20.76■□□□□ 0.91
CLCN3P51790 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN3P51790 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
CLCN3P51790 HYMAI.1-201ENST00000620949 238 ntBASIC20.76■□□□□ 0.91
CLCN3P51790 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLCN3P51790 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 AC008556.1-201ENST00000610908 2040 ntBASIC20.76■□□□□ 0.91
CLCN3P51790 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN3P51790 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN3P51790 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN3P51790 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLCN3P51790 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCN3P51790 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.75■□□□□ 0.91
CLCN3P51790 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.75■□□□□ 0.91
CLCN3P51790 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.75■□□□□ 0.91
CLCN3P51790 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN3P51790 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CLCN3P51790 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 AP000550.4-202ENST00000639755 178 ntBASIC20.75■□□□□ 0.91
CLCN3P51790 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
CLCN3P51790 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN3P51790 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLCN3P51790 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN3P51790 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN3P51790 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CLCN3P51790 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN3P51790 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN3P51790 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN3P51790 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN3P51790 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 AC005332.1-201ENST00000577698 1310 ntBASIC20.74■□□□□ 0.91
CLCN3P51790 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN3P51790 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCN3P51790 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN3P51790 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN3P51790 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLCN3P51790 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN3P51790 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLCN3P51790 LINC01311-201ENST00000565162 1445 ntBASIC20.73■□□□□ 0.91
CLCN3P51790 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms