Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 AC009237.14-201ENST00000609975 1594 ntBASIC18.82■□□□□ 0.6
HOXD12P35452 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
HOXD12P35452 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 AC004870.1-201ENST00000315132 882 ntBASIC18.82■□□□□ 0.6
HOXD12P35452 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD12P35452 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD12P35452 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD12P35452 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD12P35452 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD12P35452 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXD12P35452 AC005082.1-201ENST00000413042 2259 ntBASIC18.82■□□□□ 0.6
HOXD12P35452 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD12P35452 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD12P35452 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD12P35452 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 TSSC2-201ENST00000450217 709 ntBASIC18.81■□□□□ 0.6
HOXD12P35452 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD12P35452 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD12P35452 RN7SL510P-201ENST00000581311 263 ntBASIC18.81■□□□□ 0.6
HOXD12P35452 MIR4674-201ENST00000582457 87 ntBASIC18.81■□□□□ 0.6
HOXD12P35452 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXD12P35452 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
HOXD12P35452 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD12P35452 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 TSPY21P-201ENST00000433481 731 ntBASIC18.8■□□□□ 0.6
HOXD12P35452 TSPY23P-201ENST00000440136 739 ntBASIC18.8■□□□□ 0.6
HOXD12P35452 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXD12P35452 BX276092.5-203ENST00000456199 560 ntBASIC18.8■□□□□ 0.6
HOXD12P35452 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 AC011498.5-201ENST00000592027 486 ntBASIC18.8■□□□□ 0.6
HOXD12P35452 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD12P35452 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD12P35452 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD12P35452 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD12P35452 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXD12P35452 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 AC018445.3-201ENST00000624177 1945 ntBASIC18.79■□□□□ 0.6
HOXD12P35452 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXD12P35452 KRT17P6-201ENST00000453795 1220 ntBASIC18.79■□□□□ 0.6
HOXD12P35452 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXD12P35452 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HOXD12P35452 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXD12P35452 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXD12P35452 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXD12P35452 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms